Complete List of Publications:
Book Chapters
and Journal Articles:
Dixon Lorraine, Donnison Andrea, Ross Colleen, McDonald Ian R. 2008. Addition of bacteriocins to inhibit Listeria monocytogenes in Toroi: a traditional food of New Zealand Mãori. Annals of Microbiology 58 (2), pp 207-212.
Hetzer Adrian, McDonald Ian R, Morgan Hugh W. 2008. Venenivibrio stagnispumantis gen. nov., sp. nov., a thermophilic hydrogen-oxidizing bacterium isolated from Champagne Pool, Waiotapu, New Zealand. International Journal of Systematic and Evolutionary Microbiology 58, pp 398-403.
McDonald Ian R, Bodrossy Levente, Chen Yin, Murrell J Colin. 2008. Molecular ecology techniques for the study of aerobic methanotrophs. Applied and Environmental Microbiology Vol 74 No 5, pp 1305-1315.
Niederberger Thomas D, McDonald Ian R, Hacker Amy L, Soo Rochelle M, Barrett John E, Wall Diana H and Cary S Craig. 2008. Environmental Microbiology 10 (7), pp 1713-1724.
Cook Anthony R, Riley Paul W, Murdoch Heather, Evans Paul N and McDonald Ian R. 2007. Howardella ureilytica gen. nov., sp. nov., a Gram-positive, coccoid-shaped bacterium from a sheep rumen. International Journal of Systematic and Evolutionary Microbiology 57, pp 2940-2945.
Dixon L, Donnison A, Harfoot C, McDonald I R. 2007. Survival of Escherichia coli in toroi: a traditional Māori food. New Zealand Journal of Marine and Freshwater Research, Vol 41, pp 369-375.
Hetzer Adrian, Morgan Hugh W, McDonald Ian R, Daughney Christopher J. 2007. Microbial life in Champagne Pool, a geothermal spring in Waiotapu, New Zealand. Extremophiles 11, pp605-614
Neufeld Josh D, Schäfer Hendrik, Cox Michael J, Boden Rich, McDonald Ian R and Murrell J Colin. 2007. Stable-isotope probing implicates Methylophaga spp and novel Gammaproteobacteria in marine methanol and methylamine metabolism. International Society for Microbial Ecology 1, pp 480-491.
Dumont, Marc. G., Radajewski, Stefan m., Miguez, Carlos B., McDonald, Ian
R., and Murrell, J Colin. 2006. identification of a
complete methane monooxygenase operon from soil by combining stable isotope
probing and metagenomic analysis. Environmental Microbiology 8 (7),
pp 1240-1250.
Niederberger, Thomas D., Götz, Dorothee K., McDonald,
Ian R., Ronimus, Ron S., and Morgan, Hugh W. 2006. Ignisphaera
aggregans gen. nov., sp. nov., a novel hyperthermophilic crenarchaeote isolated
from hot springs in Rotorua and Tokaanu, New Zealand. International
Journal of Systematic and Evolutionary Microbiology 56, pp 965-971.
Wartiainen, Ingvild., Grethe Hestnes Anne., McDonald, Ian R., and
Svenning, Mette M. 2006 Methylocystic rosea sp. nov., a novel
methanotrophic bacterium from Arctic wetland soil, Svalbard, Norway (78°N).
International Journal of Systematic and Evolutionary Microbiology 56, pp
541-547.
McDonald
Ian R, Miguez Carlos B, Rogge Gerlinde,
Bourque Denis, Wendlandt Karin D, Groleau Denis & Murrell J Colin. 2006.
Diversity of soluble methane monooxygenase-containing methanotrophs isolated
from polluted environments.
FEMS Microbiol Lett
255, pp 225-232.
Wartiainen Ingvild,
Grethe Hestnes Anne,
McDonald
Ian R and Svenning Mette M. 2006.
Methylobacter tundripaludum
sp. nov., a methane-oxidizing bacterium from Arctic wetland soil on the Svalbard
islands, Norway (78o N).
International Journal of Systematic and
Evolutionary Microbiology 56, pp
109-113.
Theisen
Andreas R,
Ali
M Hanif,
Radajewski Stefan,
Dumont Marc G, Dunfield Peter F,
McDonald Ian R,
Dedysh Svetlana N,
Miguez Carlos B and
Murrell J Colin. 2005. Regulation of
methane oxidation in the facultative methanotroph
Methylocella silvestris
BL2.
Molecular Microbiology
58 (3), pp 682-692.
Lin Ju-Ling,
Joye Samantha B, Scholten
Johannes CM,
Schäfer
Hendrik,
McDonald Ian R and
Murrell J Colin. 2005. Analysis of
Methane Monooxygenase Genes in Mono Lake Suggests That Increased Methane
Oxidation Activity May Correlate with a Change in Methanotroph Community
Structure.
Applied and Environmental Microbiology,
Vol 71, No.10, pp 6458-6462.
Warner Karen L, Larkin
Michael J,
Harper David B,
Murrell
J Collin, McDonald Ian R. 2005.
Analysis of genes involved in methyl halide degradation in
Aminobacter lissarensis
CC495. Federation of European Microbiological Societies Microbiology Letters,
251, pp 45-51.
McDonald Ian R,
Kämpfer Peter, Topp Ed,
Warner Karen L,
Cox
Michael J,
Connell Hancock Tracey L,
Miller
Laurence G,
Larkin Michael J,
Ducrocq
Veronique,
Coulter Catherine,
Harper
David B,
Murrell
J Colin and
Oremland Ronald S. 2005.
Aminobacter ciceronei
sp. nov. and
Aminobacter lissarensis
sp. nov., isolated from various terrestrial environments.
International Journal of Systematic
and Evolutionary Microbiology 55,
pp 1827-1832.
Borodina, Elena, Cox,
Michael J,
McDonald,
Ian R. and Murrell, J. Colin. 2005. Use of DNA-stable isotope probing and
functional gene probes to investigate the diversity of methyl chloride-utilizing
bacteria in soil.
Environmental Microbiology
7 (9), pp 1318-1328.
McDonald,
Ian R., Smith, Kelly, Lidstrom, Mary E. 2005. Methanotrophic populations
in estuarine sediment from Newport Bay, California.
FEMS Microbiology Letters
250, pp 287-293.
Moosvi, S. Azra,
Pacheco, Catarina C.,
McDonald, Ian R.,
De Marco, Paolo,
Pearce, David A.,
Kelly, Donovan P. and
Wood, Ann P. 2005. Isolation and
properties of methanesulfonate-degrading
Afipia felis
from Antarctica and comparison with other strains of
A. felis.
Environmental Microbiology 7 (1), pp 22-33.
Hesselsoe, Martin,
Boysen, Susanne,
Iversen, Niels,
Jørgensen, Lars,
Murrell, J. Colin,
McDonald, Ian,
Radajewski, Stefan,
Thestrup, Helle &
Roslev, Peter. 2005. Degradation of
organic pollutants by methane grown microbial consortia.
Biodegradation 16, pp 435-448.
Franklin,
Mark P.,
McDonald, Ian R.,
Bourne, David G.,
Owens, Nicholas J. P.,
Upstill-Goddard, Robert C. and
Murrell, J. Colin. 2005. Bacterial
diversity in the bacterioneuston (sea surface microlayer): the bacterioneuston
through the looking glass.
Environmental Microbiology
7 (5), pp 723-736.
McDonald,
Ian R.,
Radajewski,
Stefan,
Murrell, J. Colin. 2005. Stable
isotope probing of nucleic acids in methanotrophs and methylotrophs: A review.
2005.
Organic Geochemistry 36, pp
779-787.
Schäfer,
Hendrik,
McDonald, Ian R.,
Nightingale, Phil D. and
Murrell, J. Colin. 2005. Evidence
for the presence of a CmuA methyltransferase pathway in novel marine methyl
halide-oxidizing bacteria.
Environmental Microbiology
7 (6), pp 839-852.
Anesti,
Vasiliki,
McDonald, Ian R.,
Ramaswamy, Meghna,
Wade, William G.,
Kelly, Donovan P. and
Wood, Ann P. 2005. Isolation and
molecular detection of methylotrophic bacteria occurring in the human mouth.
Environmental Microbiology
7 (8), pp 1227-1238.
Moosvi,
S. Azra,
McDonald, Ian R.,
Pearce, David A.,
Kelly, Donovan P.,
Wood, Ann P. 2005. Molecular
detection and isolation from Antarctica of methylotrophic bacteria able to grow
with methylated sulfur compounds.
Systematic and Applied Microbiology
28, pp 541-554.
Lin, Ju-Ling, Radajewski, Stefan,
Eshinimaev, Bulat T., Trotsenko, Yuri A., McDonald, Ian R. and Murrell,
J. Colin. 2004. Molecular diversity of methanotrophs in Transbaikal soda lake
sediments and identification of potentially active populations by stable isotope
probing. Environmental Microbiology 6 (10), pp 1049-1060.
Miller, Laurence G., Warner, Karen L.,
Baesman, Shaun M., Oremland, Ronald S., McDonald, Ian R., Radajewski,
Stefan and Murrell, J. Colin. 2004. Degradation of methyl bromide and methyl
chloride in soil microcosms: Use of stable C isotope fractionation and stable
isotope probing to identify reactions and the responsible microorganisms.
Geochimica et Cosmochimica Acta, Vol. 68 No.15, pp 3271-3283.
Pacheco-Oliver, M., McDonald, I.R.,
Groleau, D., Murrell, J.C. and Miguez, C.B. (2004). Detection of methane
monooxygenase genes from pristine and diesel contaminated Arctic soil samples.
Proceedings of 5th International Symposium on Environmental
Biotechnology (In Press).
Vohra, J., Anesti, V., Goonetilleka, S.,
McDonald, I.R., Kelly, D.P. and Wood, A.P. (2004). Isolation of
facultatively methylotrophic bacteria, including Methylobacterium podarium
sp. nov., from the human foot. Environ. Microbiol. (In Press).
Miller, L.G., Warner, K.L., Baesman, S.M.,
Oremland, R.S., McDonald, I.R.,
Radajewski, S. and Murrell, J.C. (2004). Degradation of methyl bromide and
methyl chloride in soil microcosms: Use of stable C isotope fractionation and
stable isotope probing to identify reactions and the responsible microorganisms.
Geophys. Geochem. Acta. (In Press).
Radajewski, S.,
McDonald, I.R. and Murrell, J.C. (2004). Stable
isotope probing of nucleic acids to identify active microbial populations. In:
Molecular Microbial Ecology Manual II. Kluwer Academic (In Press).
Borodina, Elena, McDonald, Ian R., Murrell, J., Colin. 2004.
Chloromethane-Dependent Expression of the cmu Gene Cluster of Hyphomicrobium
chloromethanicum. Applied and Environmental Microbiology, pp 4177-4186.
Anesti, Vasiliki, Vohra, Jyotsna, Goonetilleka, Shalini, McDonald, Ian R.,
Sträubler, Bettina, Stackebrandt, Erko, Kelly, Donovan P. and Wood, Ann P. 2004.
Molecular detection and isolation of facultatively methylotrophic bacteria,
including Methylobacterium podarium sp. nov., from the human foot
microflora. Environmental Microbiology 6 (8), 820-830.
Hutchens, E., Radajewski, S., Dumont, M.G.,
McDonald, I.R. and Murrell,
J.C. (2004). Analysis of methanotrophic bacteria in Movile cave by
stable-isotope probing. Environ. Microbiol. 6, 111-120 .
Murrell, J.C. and McDonald, I.R. (2003).
Methylotrophy. In: The Desk Encyclopedia of Microbiology. Schaechter, M. (Ed),
Elsevier Ltd, London pp. 678-687.
Stafford, G.P., Scanlan, J., McDonald, I.R.
and Murrell, J.C. (2003). Characterisation of rpoN, mmoR and
mmoG, genes involved in regulating the expression of soluble methane
monooxygenase in Methylosinus trichosporium OB3b. Microbiology 149,
1771-1784.
Radajewski, S.,
McDonald, I.R. and Murrell, J.C. (2003). Stable
isotope probing of nucleic acids: a window to the function of uncultured
microorganisms. Curr. Opin. Biotech. 14,
296-302
Murrell, J.C., Stafford, G. and McDonald, I.R.
(2002). The role of copper ions in regulating methane monooxygenases in
methanotrophs. In: Handbook of copper pharmacology and toxicology, Massaro, E.J.
(Ed), Humana Press, New Jersey, pp. 559-569.
Schaeffer, J.K., Goodwin, K.D.,
McDonald, I.R., Murrell, J.C. and Oremland, R.S. (2002).
Leisingera methylohalidivorans gen. nov., sp. nov., a marine methylotroph
that grows on methyl bromide. Int. J.
Syst. Evol. Microbiol. 52, 851-859.
Pacheco-Oliver, M., McDonald, I.R.,
Groleau, D., Murrell, J.C. and Miguez, C.B. (2002). Detection of methanotrophs
with highly divergent pmoA genes from Arctic soils. FEMS Microbiol. Lett.
209, 313-319.
McDonald, I.R., Warner,
K.L., McAnulla, C., Woodall, C.A., Oremland, R.S. and Murrell, J.C.
(2002). A review of bacterial methyl halide degradation: Biochemistry, genetics
and molecular ecology. Environ. Microbiol. 4,
193-203.
Bourne, D.G., McDonald, I.R. and Murrell,
J.C. (2001). Comparison of pmoA PCR primer sets as tools for
investigating methanotroph diversity in three Danish soils. Appl. Environ.
Microbiol. 67, 3802-3809.
Kaluzhnaya, M., Khmelenina, V., Eshinimaev, B.,
Suzina, N., Nikitin, D., Solonin, A., Lin, J.L., McDonald, I.R., Murrell,
J.C. and Trotsenko, Y. (2001). Taxonomic characterization of new alkaliphilic
and alkaitolerant methanotrophs from soda lakes of the southeastern Transbaikal
region and description of Methylomicrobium buryatense sp. nov. Syst.
Appl. Microbiol. 24, 166-176.
McAnulla, C., McDonald, I.R.
and Murrell, J.C. (2001). Methyl chloride utilising bacteria are ubiquitous in
the natural environment. FEMS Microbiol. Lett.
201,
151-155.
Woodall, C.A., Warner, K., Oremland, R.S.,
Murrell, J.C. and McDonald, I.R. (2001). Identification of methyl
halide-utilising genes in the methyl bromide-utilising bacterial strain IMB-1
suggests a high degree of conservation of methyl halide-specific genes in
Gram-negative bacteria. Appl. Environ. Microbiol. 67, 1959-1963.
McDonald, I.R.,
Doronina, N.V., Trotsenko, Y.A.,
McAnulla, C. and Murrell, J.C. (2001).
Hyphomicrobium chloromethanicum sp. nov.,
Methylobacterium chloromethanicum sp. nov., chloromethane-utilising bacteria
isolated from a polluted environment.
Int. J. Syst. Evol. Microbiol. 51, 119-122.
McAnulla, C., Woodall, C.A., McDonald,
I.R., Studer, A., Vuilleumier, S., Leisinger, T. and Murrell, J.C. (2001).
The chloromethane utilisation gene cluster from Hyphomicrobium
chloromethanicum strain CM2 and development of functional gene probes to
detect halomethane degrading bacteria.
Appl. Environ. Microbiol. 67, 307-316.
Kelly, D.P., McDonald, I.R. and Wood, A.P.
(2000). Proposal for the reclassification of Thiobacillus novellus as the
type species of Starkeya gen. nov., in the
a-subclass
of the Proteobacteria. Int. J. Syst.
Evol. Microbiol. 50, 1797-1802.
Fjellbirkeland, A., Bemanian, V., McDonald,
I.R., Murrell, J.C. and Jensen, H.B. (2000). Molecular analysis of an outer
membrane protein, MopB, of Methylococcus capsulatus (Bath) and structural
comparisons with proteins of the OmpA family. Arch. Microbiol 173,
346-351.
Murrell, J.C., Gilbert, B. and McDonald, I.R.
(2000). Molecular biology and regulation of methane monooxygenase. Arch.
Microbiol. 173, 325-332.
Murrell, J.C., McDonald, I.R. and Gilbert,
B. (2000). Regulation of expression of methane monooxygenases by copper ions.
Trends in Microbiology 8, 221-225.
Gilbert, B., McDonald, I.R., Finch,
R., Stafford, G., Nielsen, A. and Murrell, J.C. (2000). Molecular analysis of
the pmo (particulate methane monooxygenase) operons from two type II
methanotrophs. Appl. Environ. Microbiol.
66, 966-975.
Murrell, J.C. and McDonald, I.R. (2000).
Methylotrophy. In: Encyclopedia of Microbiology, Vol. 3, 2nd Edition. Lederberg,
J. (Ed), Academic Press, London pp. 245-255.
McDonald, I.R.,
Upton, M., Hall, G., Pickup, R.W., Edwards, C., Saunders, J.R., Ritchie, D.A.
and Murrell, J.C. (1999). Molecular ecological analysis of methanogens and
methanotrophs in blanket bog peat. Microbial Ecology 38, 225-233.
Grosse, S., Laramee, L., Wendlandt, K.D.,
McDonald, I.R., Miguez, C.B. and Kleber, H.P. (1999). Purification and
characterisation of the soluble methane monooxygenase of the type II
methanotrophic bacterium Methylocystis sp.
WI14. Appl. Environ. Microbiol. 65, 3929-3935.
Holmes, A.J., Roslev, P., McDonald, I.R.,
Iversen, N., Henriksen, K. and Murrell, J.C. (1999). Characterisation of
methanotrophic bacterial populations in soils showing atmospheric methane
uptake. Appl. Environ. Microbiol. 65,
3312-3318.
McDonald, I.R.
and Murrell, J.C. (1999). Methanotrophs. In: The
Encyclopaedia of Bioprocess Technology : Fermentation, Biocatalysis and
Bioseparation. Flickinger, M.C. and Drew, S.W. (Eds), John Wiley and Sons, New
York pp. 1732-1742.
De Marco, P., Moradas-Ferreira, P., Higgins, T.P.,
McDonald, I.R., Kenna, E.M. and Murrell, J.C. (1999). Molecular analysis
of a novel methanesulfonic acid monooxygenase from the methylotroph
Methylosulfonomonas methylovora. J. Bacteriol. 181, 2244-2251.
Bodrossy, L., Kovacs, K.L., McDonald, I.R.
and Murrell, J.C. (1999). A novel thermophilic methane-oxidising
g-proteobacterium.
FEMS Microbiol. Lett. 170, 335-341.
Murrell, J.C., McDonald, I.R. and Bourne,
D.G. (1998). Molecular methods for the study of methanotroph ecology. FEMS
Microbiol. Ecol. 27, 103-114.
McDonald, I.R.,
Riley, P.W., Sharp, R.J. and McCarthy, A.J. (1998). Survival of
plasmid-containing Bacillus subtilis released into mushroom compost.
Microbial Ecology 36, 51-59.
Edwards, C., Hales, B.A., Hall, G.H.,
McDonald, I.R., Murrell, J.C., Pickup, R.W., Ritchie, D.A., Saunders, J.R.,
Simon, B.M. and Upton, M. (1998). Microbiological processes in the terrestrial
carbon cycle: methane cycling in peat. Atmospheric Environment 32,
3247-3255.
Wood, A.P., Kelly, D.P., McDonald, I.R.,
Jordan, S.L., Morgan T.D., Khan, S., Murrell, J.C. and Borodina, Y. (1998). A
novel pink-pigmented facultative methylotroph, Methylobacterium thiocyanatum
sp. nov., capable of growth on thiocyanate or cyanate as sole nitrogen sources.
Arch. Microbiol. 169, 148-158.
McDonald, I.R.
and Murrell, J.C. (1997). The particulate methane monooxygenase gene pmoA
and its use as a functional gene probe for methanotrophs. FEMS Microbiol. Letts.
156, 205-210.
Jordan, S.L., McDonald, I.R.,
Kraczkiewicz-Dowjat, A.J., Kelly, D.P., Rainey, F.A., Murrell, J.C. and Wood,
A.P. (1997). Autotrophic growth on carbon disulfide is a property of novel
strains of Paracoccus denitrificans. Arch. Microbiol. 168,
225-236.
Ritchie, D.A., Edwards, C., McDonald, I.R.,
and Murrell, J.C. (1997). Detection of methanotrophs and
methanogens in natural environments. Global Change Biology 3, 339-350.
McDonald, I.R.
and Murrell, J.C. (1997). The methanol dehydrogenase structural gene mxaF
and its use as a functional gene probe for methanotrophs and methylotrophs.
Appl. Environ. Microbiol. 63,
3218-3224.
McDonald, I.R.,
Uchiyama, H., Kambe, S., Yagi, O. and Murrell, J.C. (1997). The soluble methane
monooxygenase gene cluster of the trichloroethylene degrading methanotroph
Methylocystis sp. strain M. Appl. Environ. Microbiol. 63, 1898-1904.
McDonald, I.R.,
Holmes, A.J., Kenna, E.M. and Murrell, J.C. (1997). Molecular methods for the
detection of methanotrophs. In: Methods in Biotechnology Vol 2: Bioremediation
Protocols. D. Sheehan (Ed), Humana Press, NJ., USA. p111-126.
McDonald, I.R.,
Kelly, D.P., Murrell, J.C. and Wood, A.P. (1997). Taxonomic relationships of
Thiobacillus aquaesulis, T. halophilus and other species of
Thiobacillus, as determined using 16S rDNA sequencing. Arch. Microbiol.
166, 394-398.
McDonald, I.R.,
Hall, G., Pickup, R. and Murrell, J.C. (1996). Methane oxidation potential and
preliminary analysis of methanotrophs in blanket bog peat using molecular
ecology techniques. FEMS Microbiol. Ecol. 21, 197-211.
Murrell, J.C., Holmes, A.J., McDonald, I.R.
and Kenna, E. (1996). Molecular ecology of methanotrophs. In: The Microbiology
of Atmospheric Trace Gases; Sources, Sinks and Global Change Processes. J.C.
Murrell and D.P. Kelly (Eds), NATO ASI Series, Springer Verlag. p135-151.
McDonald, I.R.,
Riley, P.W., Sharp, R.J. and McCarthy, A.J. (1995). Factors affecting the
electroporation of Bacillus subtilis. J. Appl. Bacteriol. 79,
213-218.
McDonald, I.R.,
Kenna, E.M. and Murrell, J.C. (1995). Detection of methanotrophic bacteria in
environmental samples with the PCR. Applied and Environmental Microbiology 61,
116-121.
Poster
Presentations:
Borodina, E., McDonald, I.R., and Murrell, J.C.
(2004). Molecular ecology and regulation of chloromethane metabolism.
Gorden research conference on Molecular basis of one-carbon metabolism, Mount
Holyoke College, South Hadley, MA, USA, 1-6 August 2004.
Schafer, H., Cox, M., Nightingale, P., McDonald, I.R.,
and Murrell, J.C. (2004). Isolation of novel marine methyl bromide
oxiding bacteria: analysis of polypeptides and funcational genes involved
in methyl halide oxidation. Gordon research conference on Molecular basis
of one-carbon metabolis, Mount Holyoke College, South Hadley, MA, USA, 1-6
August, 2004.
Miller, L.G., Baesman, S.M., Oremland, R.S., McDonald,
I.R., Warner, K.L., Radajewski, S. and Murrell, J.C. (2003).
Degradation of methyl bromide and methyl chloride in soil microcosms: use
of stable C isotope fractionation and stable isotope probing to identify
reactions and the responsible microorganisms. 16th International Symposium
on Environmental Biogeochemisry (ISEB), Aomori, Japan, 1st-6th September 2003.
Schafer, H., Cox, M., Nightingale, P., McDonald, I.R.
and Murrell, J.C. (2003). Novel methyl bromide utilising bacteria
from the marine environment. M & FMB Meeting, University of Lancaster,
11th-13th September 2003.
Cox, M., Schafer, H., Borodina, E., Warner, K.,
Nightingale, P., McDonald, I.R., and Murrell, J.C. (2003).
cmuA: a functional genetic marker for methyl bromide metabolism. M &
FMB Meeting, University of Lancaster, 11th-13th September 2003.
Borodina, E., McDonald, I.R. and Murrell, J.C.
(2002). Molecular ecology of chloromethane oxidizing bacteria in the
terrestrial environment. Gordon research conference on Molecular basis of
one-carbon metabolism, Connecticut College, New London, Connecticut, USA, 7 - 12
July, 2002.
Stafford, G., Scanlan, J., McDonald, I.R. and
Murrell, J.C. (2002). Molecular analysis of the regulation of expression of
sMMO. Gordon research conference on Molecular basis of one-carbon metabolism,
Connecticut College, New London, Connecticut, USA, 7 - 12 July, 2002.
Goodwin, K.D., Warner, K.L., McDonald, I.R. and
Murrell, J.C. (2002). Methyl bromide degradation by the marine methylotroph
Leisingera methylohalidivorans, a novel pathway? Gordon research conference
on Molecular basis of one-carbon metabolism, Connecticut College, New London,
Connecticut, USA, 7 - 12 July, 2002.
Lin, J.L., McDonald, I.R., Trotsenko, Y.A. and
Murrell, J.C. (2002). Molecular ecology of methane-oxidising bacteria in
alkaline and high temperature environments. Gordon research conference on
Molecular basis of one-carbon metabolism, Connecticut College, New London,
Connecticut, USA, 7 - 12 July, 2002.
Warner, K.L., Goodwin, K.D., Oremland, R.S.,
Murrell, J.C. and McDonald, I.R. (2002). Molecular ecology of methyl
halide degradation. Gordon research conference on Molecular basis of one-carbon
metabolism, Connecticut College, New London, Connecticut, USA, 7 - 12 July,
2002.
Warner, K., McDonald, I.R. and
Murrell, J.C. (2001). Molecular ecology of methyl halide degraders. MMEG
University of York, 17-18 April 2001.
Lin, J.L., McDonald, I.R. and
Murrell, J.C. (2001). Thermophilic and Alkaliphilic methanotrophs. MMEG
University of York, 17-18 April 2001.
Pacheco-Oliver, M., McDonald, I.R.,
Groleau, D., Murrell, J.C. and Miguez, C.B. (2001). Detection of methane
monooxygenase genes from pristine and diesel contaminated arctic soil samples.
ASM Orlando, Florida, May 2001.
McDonald, I.R., Warner,
K.L., Goodwin, K.D., Harper, D.B., Oremland, R.S. and Murrell, J.C. (2001).
Bacterial metabolism of methyl halides; Development of functional gene probes
for molecular ecology. Gordon Conference, Applied and Environmental
Microbiology, Connecticticut College, CT, USA, July 22-27, 2001.
McDonald, I.R., Pacheco-Oliver, M., Roden, B. and
Miguez, C.B. (2001). Molecular ecology of methane oxidising bacteria in low
temperature and low pH environments. ISME-9, Amsterdam, 26-31 August, 2001.
Warner, K.L., Goodwin, K.D., Oremland, R.S., Murrell,
J.C. and McDonald, I.R. (2001). Molecular ecology of methyl halide
degradation. ISME-9, Amsterdam, 26-31 August, 2001.
Lin, J.L., McDonald, I.R., Trotsenko, Y.A. and
Murrell, J.C. (2001). Molecular ecology of methane-oxidising bacteria in
alkaline and high temperature environments. ISME-9, Amsterdam, 26-31 August,
2001.
Warner, K.L., McAnulla, C., Woodall, C.A.,
Studer, A., Leisinger, T., Oremland, R.S., McDonald, I.R. and Murrell,
J.C. (2000). Molecular ecology of methyl halide degraders. SGM, Galway, 7 - 8
April, 2000.
McDonald, I.R.,
Warner, K.L., McAnulla, C., Woodall, C.A., Studer, A., Vuilleumier, S.,
Leisinger, T., Oremland, R.S., and Murrell, J.C. (2000). Molecular biology and
molecular ecology of methyl halide degraders. Gordon research conference on
Molecular basis of one-carbon metabolism, Connecticut College, New London,
Connecticut, USA, 8 - 13 July, 2000.
McDonald, I.R.,
Lin, J.L., Pacheco-Oliver, M., Miguez, C.B., Trotsenko, Y. and Murrell, J.C.
(2000). Molecular ecology of methanotrophs in extreme environments. Gordon
research conference on Molecular basis of one-carbon metabolism, Connecticut
College, New London, Connecticut, USA, 8 - 13 July, 2000.
Stafford, G.P., Gilbert, B., McDonald,
I.R. and Murrell, J.C. (2000). The molecular biology of methane
monooxygenase gene clusters. Gordon research conference on Molecular basis of
one-carbon metabolism, Connecticut College, New London, Connecticut, USA, 8 - 13
July, 2000.
Carlos Miguez's Poster
Gordon research conference on Molecular
basis of one-carbon metabolism, (2000). Connecticut College, New London, Connecticut,
USA, 8 - 13 July, 2000.
Trotsenko, Y.A., Khmelenina, V.N.,
Kalyuzhnaya, M.G., Suzina, N.E., Eshinimaev, B.C., Reshetnikov, A.S.,
McDonald, I.R. and Murrell, J.C. (2000). A new knowledge about the biology
of (halo)alkaliphilic methanotrophs. Gordon research conference on Molecular
basis of one-carbon metabolism, Connecticut College, New London, Connecticut,
USA, 8 - 13 July, 2000.
Pacheco-Oliver, M., McDonald, I.R.,
Groleau, D., Murrell, J.C. and Miguez, C.B. (2000). Detection of methane
monooxygenase genes from pristine and diesel contaminated arctic soil samples.
5th International Symposium on Environmental Biotechnology, Kyoto,
Japan.
McDonald, I.R.,
Costello, A.M., Smith, K.S., Lidstrom, M.E. and Murrell, J.C. (1999). Molecular
ecology analysis of methanotrophic populations in Newport Bay estuary,
California. SGM, Edinburgh, 13 - 16 April, 1999.
Bourne, D.G., McDonald, I.R., Roslev,
P., Iversen, N., Henricksen, K. and Murrell, J.C. (1999). Detection of
methanotrophs in Danish soils using molecular ecology techniques. SGM,
Edinburgh, 13 - 16 April, 1999.
Gilbert, B., McDonald, I.R., Finch,
R. and Murrell, J.C. (1999). Comparative analysis of the particulate methane
monooxygenase (pmo) gene clusters from Methylosinus trichosporium OB3b
and Methylocystis sp. strain M. SGM, Edinburgh, 13 - 16 April, 1999.
McAnulla, C., Woodall, C.A., McDonald,
I.R., Studer, A., Vuilleumier, S., Leisinger, T. and Murrell, J.C. (1999).
Chloromethane metabolism in Hyphomicrobium strain CM2. SGM, Edinburgh, 13
- 16 April, 1999.
Enticknap, J., McDonald, I.R. and
Murrell, J.C. (1998). The effects of nitrogen fertilisation on methane oxidising
bacteria in aerobic soils. Workshop on Genetic Fingerprinting of Microbial
Communities - present status and future perspectives, Bremen, Germany, 1-4 Feb.
1998.
Woodall, C.A., McAnulla, C., McDonald,
I.R. and Murrell, J.C. (1998). Molecular analysis of the halomethane-degrading
bacterium Hyphomicrobium strain CM2. Gordon research conference on
Molecular basis of one-carbon metabolism, New England College, Henniker, N.H.,
USA, 28th June - 3rd July, 1998.
Gilbert, B., McDonald, I.R., Finch,
R. and Murrell, J.C. (1998). Molecular characterisation of the particulate
methane monooxygenase gene clusters from Methylosinus trichosporium OB3b
and Methylocystis sp. strain M. Gordon research conference on Molecular
basis of one-carbon metabolism, New England College, Henniker, N.H., USA, 28th
June - 3rd July, 1998.
Bodrossy, L., McDonald, I.R., Hanczar,
T., Csaki, R., Rakhely, G., Murrell, J.C. and Kovacs, K.L. (1998). Approaches
to broaden the biotechnological potential of thermophilic methanotrophs. Gordon
research conference on Molecular basis of one-carbon metabolism, New England
College, Henniker, N.H., USA, 28th June - 3rd July, 1998.
McDonald, I.R.,
Bourne, D.G. and Murrell, J.C. (1998). The detection of novel methanotrophic
sequences, associated with atmospheric methane oxidation, in Danish forest
soils. ISME-8, Halifax, Nova Scotia, Canada, 9 - 14 August, 1998.
Miguez, C.B., McDonald, I.R., Rogge,
G., Bourque, D., Wendlandt, K.D., Murrell, J.C. and Groleau, D. (1998).
Detection of methane monooxygenase genes in methanotrophs from polluted
environments. ISME-8, Halifax, Nova Scotia, Canada, 9 - 14 August, 1998.
Enticknap, J., Willison, T., McDonald,
I.R., Bourne, D.G. and Murrell, J.C. (1998). Atmospheric methane oxidation
in aerobic soils. ISME-8, Halifax, Nova Scotia, Canada, 9 - 14 August, 1998.
McDonald, I.R.
and Murrell, J.C. (1997). Molecular microbiological techniques for the study of
methane oxidation in the terrestrial environment. 5th Annual Meeting of the
NERC TIGER Program. Manchester, 7-9 Jan. 1997.
Miguez, C.B., Rogge, G., McDonald, I.R.,
Bourque, D., Wendlandt, K.D., Murrell, J.C. and Groleau, D. (1997). Detection of
the soluble methane monoonoxygenase (sMMO) enzyme in isolates from various
environments. International Symposium on Bioremediation, Leipzig, Germany, 24-27
Sept. 1997.
McDonald, I.R.,
Holmes, A.J. and Murrell, J.C. (1996). Molecular microbiological techniques for
the study of methane oxidation in the terrestrial environment. 4th Annual
Meeting of the NERC TIGER Program. Grange-over-Sands, 29 Jan - 2 Feb. 1996.
McDonald, I.R.
and Murrell, J.C. (1995). Molecular ecological techniques for the detection of
methane oxidising bacteria in peat bogs. NATO Advanced Research Workshop on the
Microbiology of Atmospheric Trace Gases; Sources, Sinks and Global Change
Processes. Il Ciocco, Castelvecchio Pascoli, Tuscany, 13-18 May 1995.
McDonald, I.R.,
Kenna, E. and Murrell, J.C. (1995). Detection of methanotrophs in the
environment using molecular ecology techniques. 8th International Symposium on
Microbial Growth on C1
compounds, San Diego, USA, Aug. 1995.
McDonald, I.R.
and Murrell, J.C. (1993). Molecular ecological techniques for the study of
methane oxidation in the terrestrial environment. FEMS International Symposium
on Identification of Bacteria. Granada, Spain. 19-22 Sept. 1993.
McDonald, I.R.,
Riley, P.W., Sharp, R.J. and McCarthy, A.J. (1991). The survival of a
chloramphenicol resistance plasmid in a natural Bacillus population. 2nd
International conference on the release of genetically engineered microorganisms
(REGEM-2). Nottingham, UK. Oct. 1991.
McDonald, I.R.,
Riley, P.W., Sharp, R.J. and McCarthy, A.J. (1990). Electroporation of
Bacillus subtilis 168 trp-.
International conference on Electroporation and Electrofusion. MBL, Woods Hole,
MA., USA. 28-31 Oct. 1990.
McDonald, I.R.,
Riley, P.W., Sharp, R.J. and McCarthy, A.J. (1990). Development of Bacillus
host vector systems for studying gene transfer in the environment. SGM
symposium on gene transfer in the environment. Swansea, UK. Dec. 1990.
Conference Presentations/Published Abstracts:
Cox, M. J., Schaefer,
H., Borodina, E., McDonald, I. R., Nightingale, P. D. & Murrell, J. C. 2004.
Methyl bromide utilizing bacterial in the marine environment. 10th
International Symposium on Microbial Ecology, Mexico, August 22-27.
McDonald, I.R. (2004). Molecular
ecology of the bacterial degradation of methyl halides. ASM, Sydney, 26th
September - 1st October 2004.
McDonald, I.R.
(2002). Molecular ecology of the bacterial degradation of methyl halides.
Meeting of the Molecular Microbial Ecology Group, University of Exeter, 25-26
March 2002.
Schaefer, J.K., Goodwin, K.D., McDonald,
I.R., Murrell, J.C., and Oremland, R.S. (2000). Methyl halide
oxidation by a novel marine methylotroph, Ruegeria sp. Strain MB2.
American Geophysical Union, 2000 Fall Meeting, San Francisco, Dec 15-19.
McDonald, I.R.
and Murrell, J.C. (1998). Molecular methods for the detection of methane
oxidising bacteria in peat. ISME-8, Halifax, Nova Scotia, Canada, 9 - 14 August,
1998.
McDonald, I.R.
(1997). Functional and phylogenetic gene probes for studying methane oxidation
processes. 3rd Annual Meeting of the Molecular Microbial Ecology Group,
University of Liverpool, 7-8 Apr. 1997.
Murrell, J.C., McDonald, I.R. and
Holmes, A.J. (1997). Molecular methods for the detection of methane oxidising
bacteria. 8th European Congress on Biotechnology Budapest, Hungary, Aug. 1997.
McDonald, I.R.
(1996). Molecular ecology of methane oxidation in peat cores. 2nd Annual
Meeting of the Molecular Microbial Ecology Group, University of Newcastle, 3-4
Apr. 1996.
McDonald, I.R.
(1996). Molecular ecology of methane oxidation in peat cores. EC Microbial
Ecology Workshop, University of Warwick, Apr, 1996.
McDonald, I.R.
and Murrell, J.C. (1995). Molecular microbiological techniques for the study of
methane oxidation in the terrestrial environment. 3rd Annual Meeting of the
NERC TIGER Program. Grange-over-Sands, 2-5 Feb. 1995.
McDonald, I.R.
(1995). Use of PCR and functional gene probes to detect methane oxidisers in
peat cores. 1st Annual Meeting of the Molecular Microbial Ecology Group,
Natural History Museum, London, 15-16 Feb., 1995.
McDonald, I.R.
and Murrell, J.C. (1995). Detection of methanotrophs in peat using molecular
ecology techniques. SGM Symposium on Microbial contributions to global methane
flux. Bath, 5-6 April 1995.
McDonald, I.R.
and Murrell, J.C. (1994). Molecular microbiological techniques for the study of
methane oxidation in the terrestrial environment. 2nd Annual Meeting of the
NERC TIGER Program. Grange-over-Sands, 10-11 Feb. 1994.
Oral
Presentations/Invited seminars:
McDonald, I.R.
(2002). Methanotroph molecular biology and ecology. At the Max Planck Institute
for Terrestrial Microbiology, Marburg, Germany, 17th April 2002 at
the invitation of Prof. Ralf Conrad. (Invited speaker).
McDonald, I.R.
(2002). The molecular ecology of methane oxidising bacteria. At the Max Planck
Institute for Marine Microbiology, Bremen, Germany, 18th April 2002
at the invitation of Dr Martin Krueger. (Invited speaker).
McDonald, I.R.
(2002). Bacterial degradation of methyl halides, molecular biology and ecology.
At the University of Porto, Instituto de Biologia Celular e Molecular (IBMC),
23rd April 2001 at the invitation of Dr Pedro Moradas Ferreira. (Invited
speaker).
McDonald, I.R.
(2002). Molecular ecology of methane oxidising bacteria. At the Institute of
Biochemistry and Physiology of Microorganisms, Pushchino, Russia, 19th
June 2002 at the invitation of Prof. Yuri Trotsenko. (Invited
speaker).
McDonald, I.R.
(2002). Bacterial degradation of methyl halides. At the Institute of
Biochemistry and Physiology of Microorganisms, Pushchino, Russia, 20th
June 2002 at the invitation of Prof. Yuri Trotsenko. (Invited
speaker).
McDonald, I.R.
(2002). Molecular ecology of methyl halide degrading bacteria. Gordon conference
on Molecular basis of one carbon metabolism, Connecticut College, New London,
CT, USA, 7th - 12th July 2002 (Invited speaker).
McDonald, I.R., Warner,
K.L., McAnulla, C., Woodall, C.A., Oremland, R.S. and Murrell, J.C.
(2000). Bacterial metabolism of methyl halides; Development of functional
gene probes for molecular ecology. American Geophysical Union, 2000 Fall
Meeting, San Francisco, Dec 15-19. (Invited
speaker)
McDonald, I.R.
(2000). Molecular biology and molecular ecology of bacterial methyl halide
degradation. Invited speaker to USGS, Menlo Park, California, Dec 21.(Invited
speaker).
McDonald, I.R. (1998).
Atmospheric methane oxidation. Invited speaker to Department of Chemical
Engineering, University of Washington, Seattle, USA, July 1998.
McDonald, I.R.
(1996). Molecular ecology of methane oxidation. Departmental seminar University
of Warwick.
McDonald, I.R.
(1996). Molecular ecology of methane oxidation. Invited speaker to National
Institute for Environmental Studies, Tsukuba, Japan, Oct 1996.
McDonald, I.R.
(1992). Development of Bacillus host vector systems for studying gene
transfer in the environment. Departmental seminar University of Warwick.
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